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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6613759_6615612_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6613759 - 6615612

Intron Length:

1854

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGCATC

5'SS Class:

major

3'SS Sequence:

TGTTTTGTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTGAA

U12 Branch Point Sequence:

TGTTTTGTCACA

Flanking Amino Acid:

NPSLTDFDLQGNLWEELKDD

Intron Amino Acid Position:

567

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.5

0.65

72.2

39.5

Major BPS

63.2

0.33

1.1

55.1

42.1

Major PPT

80.9

0.7

0.9

75.8

38.1

Minor 5ss

37.1

-1.5

3.3

50.7

46.2

Minor BPS

47.3

-0.2

2.3

66.82

40.3

Associated Gene:

Gene:

FOXN1

Ensembl Gene ID:

ENSAPLG00000014618

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015232

6595301 - 6615881

20581