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Intron Name: Anas_platyrhynchos_platyrhynchos_20_664263_707362_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

664263 - 707362

Intron Length:

43100

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGCA

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTCCTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTGAG

U12 Branch Point Sequence:

AGGATCTGAGTT

Flanking Amino Acid:

VTPAEGKLLQSHPLSLCNTS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.6

0.96

0.8

77.8

Major BPS

58.6

0.21

1.5

57.1

41.8

Major PPT

0.83

0.7

81.7

30.4

Minor 5ss

30.7

-2.2

3.3

39.5

45.9

Minor BPS

45.2

-0.2

1.6

56.57

39.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012554

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013063

647052 - 707599

60548