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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6689513_6689984_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6689513 - 6689984

Intron Length:

472

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

TCCTTGCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTAAC

U12 Branch Point Sequence:

TGTGCACTAACA

Flanking Amino Acid:

EENLGVKVKRQKFRRVRKMS

Intron Amino Acid Position:

114

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

74.8

38.1

Major BPS

64.5

0.36

65.2

28.2

Major PPT

82.1

0.72

0.8

76.2

32.4

Minor 5ss

-1.6

2.9

40.9

45.4

Minor BPS

0.06

2.1

70.45

41.2

Associated Gene:

Gene:

SUPT6H

Ensembl Gene ID:

ENSAPLG00000001319

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001927

6688553 - 6709315

20763