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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6699396_6699788_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6699396 - 6699788

Intron Length:

393

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCCTT

5'SS Class:

strong_major

3'SS Sequence:

TGGCCTCTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTGAT

U12 Branch Point Sequence:

TGTGCTACAAAA

Flanking Amino Acid:

ILYMNSKKSENEFRDYPPLL

Intron Amino Acid Position:

897

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

77.8

38.7

Major BPS

72.4

0.56

1.2

63.1

44.4

Major PPT

0.58

0.9

69.4

36.8

Minor 5ss

38.4

-1.3

3.3

55.8

48.4

Minor BPS

-0.3

1.9

58.75

40.6

Associated Gene:

Gene:

SUPT6H

Ensembl Gene ID:

ENSAPLG00000001319

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001927

6688553 - 6709315

20763