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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6700441_6700965_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6700441 - 6700965

Intron Length:

525

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGAGG

5'SS Class:

strong_major

3'SS Sequence:

CTTCTTTCTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTAAT

U12 Branch Point Sequence:

TTTAGCAAAACT

Flanking Amino Acid:

GPRKGTHLLKILKQNNTRLE

Intron Amino Acid Position:

999

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

73.4

43.3

Major BPS

78.2

0.7

77.9

32.1

Major PPT

87.9

0.85

0.7

80.6

31.4

Minor 5ss

31.7

-2.1

3.1

39.7

45.9

Minor BPS

48.1

-0

2.3

77.66

44.4

Associated Gene:

Gene:

SUPT6H

Ensembl Gene ID:

ENSAPLG00000001319

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001927

6688553 - 6709315

20763