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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6703463_6705107_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6703463 - 6705107

Intron Length:

1645

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGA|GTGTATCAG

5'SS Class:

weak_major

3'SS Sequence:

CCCTCTCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

TTTGCATGACCC

Flanking Amino Acid:

LLLPALPLPGVGMTVHCRIM

Intron Amino Acid Position:

1221

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.9

0.05

1.1

44.6

38.9

Major BPS

0.62

1.4

85.7

34.9

Major PPT

78.6

0.64

0.7

72.5

25.7

Minor 5ss

34.8

-1.7

2.9

36.1

42.1

Minor BPS

48.5

-0.1

2.1

68.44

42.8

Associated Gene:

Gene:

SUPT6H

Ensembl Gene ID:

ENSAPLG00000001319

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001927

6688553 - 6709315

20763