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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6705304_6705430_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6705304 - 6705430

Intron Length:

127

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

CTGTCCCCCCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTAAAT

U12 Branch Point Sequence:

GAAGCCTAAATA

Flanking Amino Acid:

EDLKRKQQRTTYIKRVIAHP

Intron Amino Acid Position:

1286

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

0.9

71.6

40.2

Major BPS

57.4

0.18

1.1

64.9

37.3

Major PPT

67.2

0.39

0.8

58.8

Minor 5ss

34.1

-1.8

41.6

Minor BPS

50.7

0.02

1.8

58.05

41.6

Associated Gene:

Gene:

SUPT6H

Ensembl Gene ID:

ENSAPLG00000001319

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001927

6688553 - 6709315

20763