Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_20_6707283_6707362_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6707283 - 6707362

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

GTCCTTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTAAC

U12 Branch Point Sequence:

CTTTGTCTAACA

Flanking Amino Acid:

NATPANINLADLTRAVNALP

Intron Amino Acid Position:

1509

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

1.2

35.3

Major BPS

66.8

0.42

1.2

69.6

35.5

Major PPT

82.2

0.73

0.8

76.5

32.1

Minor 5ss

28.4

-2.5

2.9

33.4

41.6

Minor BPS

53.6

0.11

2.1

71.45

41.1

Associated Gene:

Gene:

SUPT6H

Ensembl Gene ID:

ENSAPLG00000001319

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001927

6688553 - 6709315

20763