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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6707530_6708760_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6707530 - 6708760

Intron Length:

1231

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAGGTGTC

5'SS Class:

major

3'SS Sequence:

CTGCTTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTAAC

U12 Branch Point Sequence:

TGTCCTCTAACC

Flanking Amino Acid:

GSGGGSSAYHVFTTPAQQPV

Intron Amino Acid Position:

1565

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.1

0.59

1.1

74.5

35.6

Major BPS

72.3

0.55

73.3

28.9

Major PPT

81.7

0.71

0.8

76.6

Minor 5ss

38.3

-1.3

3.6

56.1

42.1

Minor BPS

62.4

0.37

1.7

73.68

36.5

Associated Gene:

Gene:

SUPT6H

Ensembl Gene ID:

ENSAPLG00000001319

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001927

6688553 - 6709315

20763