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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6713174_6713607_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6713174 - 6713607

Intron Length:

434

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGGAGA

5'SS Class:

strong_major

3'SS Sequence:

CTGCACCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCCCAA

U12 Branch Point Sequence:

CCTTCCTGCACC

Flanking Amino Acid:

GSNADAYEQLGEHRDTDRCC

Intron Amino Acid Position:

168

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

69.6

42.7

Major BPS

54.3

0.11

1.2

64.5

33.7

Major PPT

65.5

0.35

0.9

57.5

Minor 5ss

31.2

-2.2

3.1

31.3

42.6

Minor BPS

55.5

0.16

66.78

44.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027043

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047100

6712231 - 6714109

1879