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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6733158_6734163_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6733158 - 6734163

Intron Length:

1006

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCTGC

5'SS Class:

strong_major

3'SS Sequence:

TCTGCCTTCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTAAC

U12 Branch Point Sequence:

GTACCACTAACA

Flanking Amino Acid:

CGDLFTACLTDRGIIMTFGS

Intron Amino Acid Position:

187

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

69.2

38.5

Major BPS

64.5

0.36

65.2

28.2

Major PPT

77.4

0.62

0.8

68.8

37.1

Minor 5ss

38.8

-1.3

50.2

46.4

Minor BPS

49.6

-0

1.9

65.45

39.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016169

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016875

6728252 - 6739076

10825