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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6736797_6736962_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6736797 - 6736962

Intron Length:

166

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGCTT

5'SS Class:

strong_major

3'SS Sequence:

TGTCCCTCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGTGCAG

U12 Branch Point Sequence:

CCTGCGTGCAGC

Flanking Amino Acid:

GDAFTVAIGADGEVCTWGKG

Intron Amino Acid Position:

410

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.9

78.6

37.3

Major BPS

39.6

-0.6

1.7

46.5

Major PPT

79.9

0.67

0.8

73.6

31.4

Minor 5ss

31.2

-2.1

3.5

46.7

48.6

Minor BPS

34.3

-1.2

2.5

41.78

45.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016169

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016875

6728252 - 6739076

10825