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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6746441_6746518_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6746441 - 6746518

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGACGG

5'SS Class:

strong_major

3'SS Sequence:

CCTCTGTCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCTGAC

U12 Branch Point Sequence:

ACCACCTGACCG

Flanking Amino Acid:

AKEFVFDTIQNHQYQCPRYP

Intron Amino Acid Position:

209

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.77

0.9

62.5

43.9

Major BPS

60.1

0.25

35.6

Major PPT

73.3

0.52

0.8

64.5

36.5

Minor 5ss

25.9

-2.8

2.9

30.2

42.8

Minor BPS

45.9

-0.4

1.8

47.15

45.6

Associated Gene:

Gene:

TRAF4

Ensembl Gene ID:

ENSAPLG00000023865

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017531

6742821 - 6748255

5435