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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6756759_6769288_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6756759 - 6769288

Intron Length:

12530

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGTCAC

5'SS Class:

strong_major

3'SS Sequence:

CCTTTCTCCGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTGAT

U12 Branch Point Sequence:

CATTGATGAATT

Flanking Amino Acid:

STPHPGTCSAGDTTQKMRSA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

68.4

38.7

Major BPS

76.2

0.65

39.8

Major PPT

81.2

0.7

76.4

25.6

Minor 5ss

28.6

-2.5

2.7

27.3

36.3

Minor BPS

47.1

-0.1

2.1

67.19

43.5

Associated Gene:

Gene:

FAM222B

Ensembl Gene ID:

ENSAPLG00000027820

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034765

6753715 - 6769502

15788