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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6820956_6821051_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
6820956 - 6821051

Intron Length:
96

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CCG|GTGAGCCCC

5'SS Class:
major

3'SS Sequence:
TGCCCCTCCGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCCCCAC

U12 Branch Point Sequence:
CCGTCCCCACCT

Flanking Amino Acid:
PHLHLLVNNAGVSAGGTTED

Intron Amino Acid Position:
289

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73.5
0.56
1
57.1
42.2

Major BPS
49.9
-0
1.3
60.3
37.5

Major PPT
71.3
0.48
0.8
65.1
30.5

Minor 5ss
34.2
-1.8
3
44.2
43.2

Minor BPS
44.2
-0.3
2.1
60.38
48.8

Associated Gene:

Gene:
DHRS13

Ensembl Gene ID:

Chromosome:
20

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

6819481 - 6823649
4169