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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6824005_6824265_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6824005 - 6824265

Intron Length:

261

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTGAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TTCCTTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACCTGAC

U12 Branch Point Sequence:

TGTACCTGACGT

Flanking Amino Acid:

SIVAKVQSVIKRHKSRKQEE

Intron Amino Acid Position:

810

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

0.9

35.2

Major BPS

60.1

0.25

35.6

Major PPT

90.5

0.91

0.6

83.8

31.2

Minor 5ss

32.6

-2

3.3

40.4

Minor BPS

48.1

-0

2.1

70.55

45.7

Associated Gene:

Gene:

PHF12

Ensembl Gene ID:

ENSAPLG00000015321

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019246

6822670 - 6838722

16053

ENSAPLT00000015990

6823670 - 6838774

15105