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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6829315_6831237_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6829315 - 6831237

Intron Length:

1923

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGCC

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCTCTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GACATAT

U12 Branch Point Sequence:

TTCTCTGCACCA

Flanking Amino Acid:

NRFCSPAPPSDGKVSPSTLS

Intron Amino Acid Position:

614

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.9

77.9

31.9

Major BPS

49.4

-0

1.2

38.6

Major PPT

85.3

0.79

0.6

81.4

23.6

Minor 5ss

30.5

-2.2

3.5

41.8

45.1

Minor BPS

44.7

-0.4

2.3

62.68

44.2

Associated Gene:

Gene:

PHF12

Ensembl Gene ID:

ENSAPLG00000015321

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015990

6823670 - 6838774

15105

ENSAPLT00000019246

6822670 - 6838722

16053