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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6834113_6834808_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6834113 - 6834808

Intron Length:

696

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGCAGG

5'SS Class:

strong_major

3'SS Sequence:

TCTGATCACCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTGAT

U12 Branch Point Sequence:

AGATCCCTAACT

Flanking Amino Acid:

MCPNHIEHVVLNQKNLTLSN

Intron Amino Acid Position:

233

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

65.4

Major BPS

82.5

0.81

0.8

71.4

36.6

Major PPT

67.3

0.39

58.5

41.9

Minor 5ss

38.9

-1.2

2.8

45.7

43.7

Minor BPS

68.1

0.65

1.7

81.6

Associated Gene:

Gene:

PHF12

Ensembl Gene ID:

ENSAPLG00000015321

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019246

6822670 - 6838722

16053

ENSAPLT00000015990

6823670 - 6838774

15105