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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6834942_6836077_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6834942 - 6836077

Intron Length:

1136

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TCTCTCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATAAGAT

U12 Branch Point Sequence:

TGGGAAATAAGA

Flanking Amino Acid:

LPVKVCFTCNRSCRVAPLIQ

Intron Amino Acid Position:

188

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

81.6

32.3

Major BPS

58.6

0.22

1.1

55.1

40.4

Major PPT

88.8

0.87

0.6

23.9

Minor 5ss

-1.7

2.9

44.9

43.1

Minor BPS

37.9

-0.9

2.1

47.24

42.1

Associated Gene:

Gene:

PHF12

Ensembl Gene ID:

ENSAPLG00000015321

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019246

6822670 - 6838722

16053

ENSAPLT00000015990

6823670 - 6838774

15105