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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6837113_6838649_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6837113 - 6838649

Intron Length:

1537

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGTCT

5'SS Class:

strong_major

3'SS Sequence:

TCATGTCGTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

GCCTCCATGATA

Flanking Amino Acid:

GCVTAALCAERSENRRKSWG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

75.5

34.8

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

71.2

0.48

65.4

40.9

Minor 5ss

38.7

-1.3

3.4

56.7

47.6

Minor BPS

52.9

0.08

1.6

59.72

40.4

Associated Gene:

Gene:

PHF12

Ensembl Gene ID:

ENSAPLG00000015321

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019246

6822670 - 6838722

16053

ENSAPLT00000015990

6823670 - 6838774

15105