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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6868005_6868544_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6868005 - 6868544

Intron Length:

540

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCGGCG

5'SS Class:

major

3'SS Sequence:

CCGTGCCCCACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGTCAC

U12 Branch Point Sequence:

TCACCCCGATGT

Flanking Amino Acid:

RHRDTLLLEQFVLPHSRGSS

Intron Amino Acid Position:

108

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.5

0.34

1.3

53.2

Major BPS

59.8

0.24

1.3

63.1

44.5

Major PPT

65.1

0.34

0.9

33.6

Minor 5ss

-1.8

3.7

47.7

Minor BPS

39.7

-0.7

2.1

56.1

45.4

Associated Gene:

Gene:

PIPOX

Ensembl Gene ID:

ENSAPLG00000030760

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035079

6867505 - 6871508

4004

ENSAPLT00000023380

6867505 - 6871235

3731