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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6868694_6868905_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6868694 - 6868905

Intron Length:

212

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGACGGGG

5'SS Class:

major

3'SS Sequence:

GGTGGGGACGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATGTCAC

U12 Branch Point Sequence:

TTGTCCCCAATG

Flanking Amino Acid:

LEAEAGTSLYRRTGLVVLGP

Intron Amino Acid Position:

157

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.1

0.45

1.2

54.8

44.4

Major BPS

66.1

0.4

1.2

69.1

37.9

Major PPT

49.3

-0

1.1

38.8

43.8

Minor 5ss

28.7

-2.4

3.5

37.8

47.1

Minor BPS

53.2

-0

64.46

43.6

Associated Gene:

Gene:

PIPOX

Ensembl Gene ID:

ENSAPLG00000030760

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035079

6867505 - 6871508

4004

ENSAPLT00000023380

6867505 - 6871235

3731