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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6869108_6869197_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6869108 - 6869197

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TGCCCGCACCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTCCAT

U12 Branch Point Sequence:

CTGCCCGCACCC

Flanking Amino Acid:

RADRALRAVQEVFRRHGGTL

Intron Amino Acid Position:

225

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

71.2

34.2

Major BPS

64.7

0.37

1.3

74.7

Major PPT

60.1

0.23

50.3

38.4

Minor 5ss

27.1

-2.6

3.2

41.6

Minor BPS

40.7

-0.7

2.3

51.55

45.5

Associated Gene:

Gene:

PIPOX

Ensembl Gene ID:

ENSAPLG00000030760

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035079

6867505 - 6871508

4004

ENSAPLT00000023380

6867505 - 6871235

3731