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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6869381_6869450_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6869381 - 6869450

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGATTT

5'SS Class:

strong_major

3'SS Sequence:

CCCCCCCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

CACTGCTGACCC

Flanking Amino Acid:

APLGLRLPLQPLRINVCYWR

Intron Amino Acid Position:

286

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.7

86.7

Major BPS

66.3

0.4

1.1

41.8

Major PPT

67.8

0.4

0.7

60.8

21.8

Minor 5ss

38.4

-1.3

3.3

55.7

48.5

Minor BPS

-0.4

2.1

51.81

45.3

Associated Gene:

Gene:

PIPOX

Ensembl Gene ID:

ENSAPLG00000030760

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035079

6867505 - 6871508

4004

ENSAPLT00000023380

6867505 - 6871235

3731