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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6869604_6869675_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6869604 - 6869675

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCGGG

5'SS Class:

strong_major

3'SS Sequence:

CGGCTGTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTGAG

U12 Branch Point Sequence:

TTTGTCCCCACT

Flanking Amino Acid:

PALEYPGLVKVCYHHGSPVD

Intron Amino Acid Position:

337

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

63.1

43.4

Major BPS

48.9

-0

1.5

46.7

38.9

Major PPT

63.5

0.3

53.4

41.5

Minor 5ss

30.3

-2.3

3.3

37.8

47.1

Minor BPS

44.9

-0.3

2.3

72.26

44.7

Associated Gene:

Gene:

PIPOX

Ensembl Gene ID:

ENSAPLG00000030760

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035079

6867505 - 6871508

4004

ENSAPLT00000023380

6867505 - 6871235

3731