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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6870029_6870104_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6870029 - 6870104

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAGGCGAG

5'SS Class:

major

3'SS Sequence:

CTCCTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGCCAT

U12 Branch Point Sequence:

TCCCCCCCAACT

Flanking Amino Acid:

SNIVIGAGFSGHGFKLAPVV

Intron Amino Acid Position:

415

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.5

0.44

1.2

54.1

45.2

Major BPS

46.8

-0.2

1.4

53.8

41.9

Major PPT

74.8

0.56

0.7

24.8

Minor 5ss

33.8

-1.8

3.5

37.1

47.5

Minor BPS

50.2

0.08

1.9

70.64

45.7

Associated Gene:

Gene:

PIPOX

Ensembl Gene ID:

ENSAPLG00000030760

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023380

6867505 - 6871235

3731