Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_20_6890604_6891463_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6890604 - 6891463

Intron Length:

860

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAC|GTGGGTACC

5'SS Class:

major

3'SS Sequence:

CGCTGTGTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

CCTCCCTCACCG

Flanking Amino Acid:

LTEDQIRGKDEEIQQLKSKL

Intron Amino Acid Position:

1299

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.6

0.37

1.3

65.8

40.2

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

71.4

0.48

64.2

41.5

Minor 5ss

31.5

-2.1

2.9

36.4

33.2

Minor BPS

47.5

-0.3

52.75

47.6

Associated Gene:

Gene:

MYO18A

Ensembl Gene ID:

ENSAPLG00000014555

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025662

6886051 - 6934386

48336

ENSAPLT00000025432

6886051 - 6934386

48336

ENSAPLT00000022537

6886051 - 6934386

48336

ENSAPLT00000015221

6886051 - 6934386

48336