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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6891608_6892067_R


Intron Information:

Intron Rank:
23

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
6891608 - 6892067

Intron Length:
460

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTTCGTGGC

5'SS Class:
major

3'SS Sequence:
GTGCCCCGCGCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGCCGAC

U12 Branch Point Sequence:
CCGTGCCGACGC

Flanking Amino Acid:
LARQLFKKRKIQDLAIRCVQ

Intron Amino Acid Position:
1251

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
72.2
0.52
1.2
62.8
42.2

Major BPS
47.5
-0.1
1.3
43.8
40.8

Major PPT
60.7
0.24
1
54.1
36.5

Minor 5ss
28.3
-2.5
3.1
36.1
40.7

Minor BPS
31.6
-1.4
2.1
34.75
41.5

Associated Gene:

Gene:
MYO18A

Ensembl Gene ID:

Chromosome:
20

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

6886051 - 6934386
48336

6886051 - 6934386
48336

6886051 - 6934386
48336

6886051 - 6934386
48336