Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_20_6896190_6896267_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6896190 - 6896267

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACACAAC

5'SS Class:

major

3'SS Sequence:

GTGTCCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCAGCAC

U12 Branch Point Sequence:

CAGTCAGCACCC

Flanking Amino Acid:

LFTLLISLLNRALKSSQHSV

Intron Amino Acid Position:

812

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.5

0.51

1.1

65.8

40.2

Major BPS

46.4

-0.2

1.4

53.6

41.6

Major PPT

69.5

0.44

0.9

62.5

34.6

Minor 5ss

-1.4

3.2

51.2

45.6

Minor BPS

36.2

-1

2.3

44.58

43.3

Associated Gene:

Gene:

MYO18A

Ensembl Gene ID:

ENSAPLG00000014555

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025662

6886051 - 6934386

48336

ENSAPLT00000025432

6886051 - 6934386

48336

ENSAPLT00000022537

6886051 - 6934386

48336

ENSAPLT00000015221

6886051 - 6934386

48336