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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6897086_6898378_R


Intron Information:

Intron Rank:
11

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
6897086 - 6898378

Intron Length:
1293

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAACGGGG

5'SS Class:
major

3'SS Sequence:
TTTTGCAATGCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTGCAA

U12 Branch Point Sequence:
CCTTTTGCAATG

Flanking Amino Acid:
CHLGAAGATKDADEAGRKQF

Intron Amino Acid Position:
725

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73.4
0.55
1.2
58.7
46.2

Major BPS
65.8
0.39
1.4
77.7
37.1

Major PPT
77
0.61
1
71.3
38.6

Minor 5ss
34.2
-1.8
3.6
46.8
48.5

Minor BPS
42.3
-0.7
2.1
45.72
42.3

Associated Gene:

Gene:
MYO18A

Ensembl Gene ID:

Chromosome:
20

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

6886051 - 6934386
48336