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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6898023_6898378_R


Intron Information:

Intron Rank:
10

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
6898023 - 6898378

Intron Length:
356

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAACGGGG

5'SS Class:
major

3'SS Sequence:
TGTCCTCCCACAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ACCTAAC

U12 Branch Point Sequence:
CCCCACCTAACG

Flanking Amino Acid:
CHLGAAGATKEPLADGADAD

Intron Amino Acid Position:
713

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73.4
0.55
1.2
58.7
46.2

Major BPS
63.2
0.33
1
63.6
30.5

Major PPT
75.4
0.57
0.8
69
31.6

Minor 5ss
34.2
-1.8
3.6
46.8
48.5

Minor BPS
45
-0.5
1.9
46.31
45.9

Associated Gene:

Gene:
MYO18A

Ensembl Gene ID:

Chromosome:
20

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

6886051 - 6934386
48336

6886051 - 6934386
48336