Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_20_6899844_6899960_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6899844 - 6899960

Intron Length:

117

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGACACCG

5'SS Class:

major

3'SS Sequence:

CTTGTCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCCGAG

U12 Branch Point Sequence:

GGGTGCCGAGCG

Flanking Amino Acid:

LSSPSMYSEKVMHMFKGCRR

Intron Amino Acid Position:

492

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.1

0.47

1.2

43.1

Major BPS

41.9

-0.5

1.6

37.9

43.6

Major PPT

0.56

0.8

35.9

Minor 5ss

32.4

-2

45.5

Minor BPS

36.5

-1.1

2.1

38.86

43.6

Associated Gene:

Gene:

MYO18A

Ensembl Gene ID:

ENSAPLG00000014555

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022537

6886051 - 6934386

48336

ENSAPLT00000015221

6886051 - 6934386

48336

ENSAPLT00000025662

6886051 - 6934386

48336

ENSAPLT00000025432

6886051 - 6934386

48336