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Intron Name: Anas_platyrhynchos_platyrhynchos_20_7002245_7003140_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7002245 - 7003140

Intron Length:

896

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTCAC

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTCCTGAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

TAATATTGAATT

Flanking Amino Acid:

CLGSASDLLEVHKKPLQEVE

Intron Amino Acid Position:

118

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

0.9

36.6

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

77.7

0.62

79.6

26.4

Minor 5ss

40.6

-1

2.8

52.4

44.8

Minor BPS

56.1

0.27

1.6

72.2

38.4

Associated Gene:

Gene:

TAOK1

Ensembl Gene ID:

ENSAPLG00000012249

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012820

6993441 - 7027440

34000