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Intron Name: Anas_platyrhynchos_platyrhynchos_20_7012558_7013788_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

7012558 - 7013788

Intron Length:

1231

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGCATT

5'SS Class:

strong_major

3'SS Sequence:

ATTTGCTGATAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTCTTTTTATTC

Flanking Amino Acid:

SNSSVIHLKPEEENYREESD

Intron Amino Acid Position:

402

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.9

0.8

82.1

37.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

0.16

1.2

Minor 5ss

45.8

-0.4

2.9

67.6

43.1

Minor BPS

60.5

0.31

1.5

68.82

37.9

Associated Gene:

Gene:

TAOK1

Ensembl Gene ID:

ENSAPLG00000012249

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012820

6993441 - 7027440

34000