Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_20_7014739_7015510_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7014739 - 7015510

Intron Length:

772

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGAGAT

5'SS Class:

strong_major

3'SS Sequence:

GGATTTGCTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTGAT

U12 Branch Point Sequence:

TGCTTTTGGATT

Flanking Amino Acid:

KKHQAAMEKEAKVMANEEKK

Intron Amino Acid Position:

526

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

75.1

35.1

Major BPS

74.7

0.61

0.9

63.4

35.6

Major PPT

0.34

Minor 5ss

30.7

-2.2

3.7

46.1

49.1

Minor BPS

51.5

0.13

1.4

67.18

38.3

Associated Gene:

Gene:

TAOK1

Ensembl Gene ID:

ENSAPLG00000012249

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012820

6993441 - 7027440

34000