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Intron Name: Anas_platyrhynchos_platyrhynchos_20_7021869_7022948_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7021869 - 7022948

Intron Length:

1080

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTGAGTCGC

5'SS Class:

major

3'SS Sequence:

CTGCCTTTCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGTGAA

U12 Branch Point Sequence:

ACATCTCTATTG

Flanking Amino Acid:

SINEMLSTQALRLDEAQEAE

Intron Amino Acid Position:

788

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.6

0.41

1.1

56.5

42.7

Major BPS

64.3

0.35

1.2

55.4

Major PPT

76.2

0.59

0.8

68.3

37.4

Minor 5ss

-2.1

45.5

42.5

Minor BPS

44.7

-0.5

1.9

46.84

40.7

Associated Gene:

Gene:

TAOK1

Ensembl Gene ID:

ENSAPLG00000012249

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012820

6993441 - 7027440

34000