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Intron Name: Anas_platyrhynchos_platyrhynchos_20_7069827_7071074_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7069827 - 7071074

Intron Length:

1248

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAAAATA

5'SS Class:

major

3'SS Sequence:

TTGTGCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

CCGTTTGTAATT

Flanking Amino Acid:

DSSTDEEQQKEVPELPGAGH

Intron Amino Acid Position:

739

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.3

0.53

1.2

75.3

34.1

Major BPS

84.4

0.85

1.1

34.5

Major PPT

80.2

0.68

0.9

73.7

36.9

Minor 5ss

32.8

-2

2.9

44.9

Minor BPS

47.9

-0

61.75

43.8

Associated Gene:

Gene:

SSH2

Ensembl Gene ID:

ENSAPLG00000011550

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012050

7067892 - 7132389

64498

ENSAPLT00000012055

7067892 - 7110691

42800