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Intron Name: Anas_platyrhynchos_platyrhynchos_20_7071919_7076149_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7071919 - 7076149

Intron Length:

4231

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCAGA

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTCCCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAAACAC

U12 Branch Point Sequence:

TTCTTTCCCACA

Flanking Amino Acid:

LEEYQGILLASKQRHNKLWR

Intron Amino Acid Position:

457

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

74.1

38.4

Major BPS

47.8

-0.1

53.1

30.9

Major PPT

84.6

0.78

0.7

80.2

25.4

Minor 5ss

33.3

-1.9

2.8

45.7

Minor BPS

-0.5

2.1

59.19

41.2

Associated Gene:

Gene:

SSH2

Ensembl Gene ID:

ENSAPLG00000011550

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012050

7067892 - 7132389

64498

ENSAPLT00000012055

7067892 - 7110691

42800