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Intron Name: Anas_platyrhynchos_platyrhynchos_20_7078262_7079469_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7078262 - 7079469

Intron Length:

1208

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

TGTTTCCGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

GCATTCTTATCT

Flanking Amino Acid:

ASNLEDLQNRGVRYILNVTR

Intron Amino Acid Position:

341

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

76.2

39.9

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

78.8

0.65

0.9

73.7

36.9

Minor 5ss

35.6

-1.6

2.7

37.6

Minor BPS

61.9

0.45

1.6

73.06

43.7

Associated Gene:

Gene:

SSH2

Ensembl Gene ID:

ENSAPLG00000011550

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012055

7067892 - 7110691

42800

ENSAPLT00000012050

7067892 - 7132389

64498