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Intron Name: Anas_platyrhynchos_platyrhynchos_20_7082182_7084026_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7082182 - 7084026

Intron Length:

1845

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTAAGTCGG

5'SS Class:

major

3'SS Sequence:

TCTCTTGTGATAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTGAC

U12 Branch Point Sequence:

CTCCTGTTGACT

Flanking Amino Acid:

RPDSPALFTDVPTERERTER

Intron Amino Acid Position:

251

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.5

0.48

1.2

56.6

47.9

Major BPS

71.3

0.53

1.1

63.1

44.5

Major PPT

70.7

0.46

68.1

37.6

Minor 5ss

35.6

-1.6

2.9

42.2

44.3

Minor BPS

48.6

-0

2.1

67.57

43.8

Associated Gene:

Gene:

SSH2

Ensembl Gene ID:

ENSAPLG00000011550

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012055

7067892 - 7110691

42800

ENSAPLT00000012050

7067892 - 7132389

64498