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Intron Name: Anas_platyrhynchos_platyrhynchos_20_7084222_7085375_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7084222 - 7085375

Intron Length:

1154

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGCACT

5'SS Class:

strong_major

3'SS Sequence:

TTCCCCTTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAT

U12 Branch Point Sequence:

AATCCTGCAAGT

Flanking Amino Acid:

IFKPVSVQAMWSALQSLHKA

Intron Amino Acid Position:

186

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

0.9

77.1

37.8

Major BPS

0.75

78.6

Major PPT

75.9

0.58

0.7

31.5

Minor 5ss

42.2

-0.9

2.9

56.1

42.2

Minor BPS

42.1

-0.5

2.3

61.18

42.5

Associated Gene:

Gene:

SSH2

Ensembl Gene ID:

ENSAPLG00000011550

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012055

7067892 - 7110691

42800

ENSAPLT00000012050

7067892 - 7132389

64498