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Intron Name: Anas_platyrhynchos_platyrhynchos_20_7085442_7086220_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7085442 - 7086220

Intron Length:

779

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

TTCTTCTCTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

ACGTTTTTACTG

Flanking Amino Acid:

SDTLIHLDGDGGFSVSTDNR

Intron Amino Acid Position:

164

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

75.7

34.4

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

88.3

0.86

0.7

81.1

Minor 5ss

31.4

-2.1

3.2

35.2

41.4

Minor BPS

48.2

-0.2

1.6

47.92

40.9

Associated Gene:

Gene:

SSH2

Ensembl Gene ID:

ENSAPLG00000011550

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012055

7067892 - 7110691

42800

ENSAPLT00000012050

7067892 - 7132389

64498