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Intron Name: Anas_platyrhynchos_platyrhynchos_20_7086290_7088616_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7086290 - 7088616

Intron Length:

2327

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TCTCTCATTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTCAT

U12 Branch Point Sequence:

ATGCCCTGACCT

Flanking Amino Acid:

VLGMDFSSNDSSTCTMGLVL

Intron Amino Acid Position:

141

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.85

0.9

76.4

39.6

Major BPS

82.6

0.81

0.9

83.3

27.7

Major PPT

83.1

0.75

0.8

77.5

29.6

Minor 5ss

35.2

-1.7

3.5

48.8

47.4

Minor BPS

54.6

0.22

1.8

73.03

43.4

Associated Gene:

Gene:

SSH2

Ensembl Gene ID:

ENSAPLG00000011550

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012055

7067892 - 7110691

42800

ENSAPLT00000012050

7067892 - 7132389

64498