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Intron Name: Anas_platyrhynchos_platyrhynchos_20_7088739_7092684_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7088739 - 7092684

Intron Length:

3946

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAGGCTGG

5'SS Class:

major

3'SS Sequence:

TTCGTTTCCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

GCTGCCTGCACT

Flanking Amino Acid:

LLRPEDNIRLAVRLESTYQN

Intron Amino Acid Position:

101

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.5

0.46

1.1

53.3

46.3

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

77.7

0.62

0.8

77.1

31.6

Minor 5ss

-0.9

3.2

52.2

46.9

Minor BPS

49.5

0.04

2.1

69.32

47.1

Associated Gene:

Gene:

SSH2

Ensembl Gene ID:

ENSAPLG00000011550

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012055

7067892 - 7110691

42800

ENSAPLT00000012050

7067892 - 7132389

64498