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Intron Name: Anas_platyrhynchos_platyrhynchos_20_7092750_7097155_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7092750 - 7097155

Intron Length:

4406

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTCCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAG

U12 Branch Point Sequence:

CTATTTTTGAGT

Flanking Amino Acid:

RISHRRNKHAGDLQQHLQAM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

35.3

Major BPS

72.4

0.56

1.5

71.4

45.1

Major PPT

88.4

0.86

0.7

81.3

30.8

Minor 5ss

31.6

-2.1

3.3

41.1

45.4

Minor BPS

55.2

0.24

1.6

70.38

41.4

Associated Gene:

Gene:

SSH2

Ensembl Gene ID:

ENSAPLG00000011550

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012055

7067892 - 7110691

42800

ENSAPLT00000012050

7067892 - 7132389

64498