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Intron Name: Anas_platyrhynchos_platyrhynchos_20_7168263_7172143_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7168263 - 7172143

Intron Length:

3881

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

TATTTTTGTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

AAATCCAGAACC

Flanking Amino Acid:

DLFLDCDYGKVGLLDRQKIL

Intron Amino Acid Position:

339

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.1

0.97

0.8

83.2

30.8

Major BPS

84.4

0.85

1.1

34.5

Major PPT

79.5

0.66

0.9

73.8

41.4

Minor 5ss

38.7

-1.3

2.8

48.1

47.6

Minor BPS

54.9

0.13

1.7

65.75

38.5

Associated Gene:

Gene:

EFCAB5

Ensembl Gene ID:

ENSAPLG00000011243

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032701

7152792 - 7189414

36623

ENSAPLT00000011715

7152792 - 7189414

36623