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Intron Name: Anas_platyrhynchos_platyrhynchos_20_717185_722095_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

717185 - 722095

Intron Length:

4911

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGGGT

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTTGTTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTACAA

U12 Branch Point Sequence:

AAAATATTGAGT

Flanking Amino Acid:

QEGQQFSPQKYSPESKTKAK

Intron Amino Acid Position:

531

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.9

76.9

38.6

Major BPS

64.7

0.37

31.5

Major PPT

81.1

0.7

0.9

81.2

36.5

Minor 5ss

30.9

-2.2

3.6

46.8

48.5

Minor BPS

43.9

-0.3

1.8

56.52

39.3

Associated Gene:

Gene:

HSF5

Ensembl Gene ID:

ENSAPLG00000012874

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013398

712399 - 740179

27781