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Intron Name: Anas_platyrhynchos_platyrhynchos_20_7172244_7172892_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7172244 - 7172892

Intron Length:

649

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTAAGTATA

5'SS Class:

major

3'SS Sequence:

TTTTCTACATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTATAAA

U12 Branch Point Sequence:

TTTTTCTACATT

Flanking Amino Acid:

AKRRFCNPRQWPIIELQEIE

Intron Amino Acid Position:

372

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

1.1

80.1

34.8

Major BPS

66.3

0.4

1.1

34.4

Major PPT

75.8

0.58

0.9

76.4

32.1

Minor 5ss

41.3

-1

2.8

52.2

44.4

Minor BPS

57.4

0.31

2.1

82.74

39.5

Associated Gene:

Gene:

EFCAB5

Ensembl Gene ID:

ENSAPLG00000011243

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032701

7152792 - 7189414

36623

ENSAPLT00000011715

7152792 - 7189414

36623