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Intron Name: Anas_platyrhynchos_platyrhynchos_20_7173979_7174937_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7173979 - 7174937

Intron Length:

959

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGCAC

5'SS Class:

strong_major

3'SS Sequence:

TTTAAAATTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

TTCTCTTTAAAA

Flanking Amino Acid:

GFQCSSHRTAGPAYSDRQDS

Intron Amino Acid Position:

529

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

69.1

37.5

Major BPS

73.1

0.58

79.6

29.1

Major PPT

75.1

0.56

67.6

42.2

Minor 5ss

25.6

-2.8

3.1

31.9

42.9

Minor BPS

75.8

0.81

1.3

80.33

35.6

Associated Gene:

Gene:

EFCAB5

Ensembl Gene ID:

ENSAPLG00000011243

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032701

7152792 - 7189414

36623