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Intron Name: Anas_platyrhynchos_platyrhynchos_20_7185129_7185957_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7185129 - 7185957

Intron Length:

829

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGCTCT

5'SS Class:

strong_major

3'SS Sequence:

ACTCTCATTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAT

U12 Branch Point Sequence:

CTCTCTTTACTC

Flanking Amino Acid:

VLFLRKENLLRDYLLKCIDT

Intron Amino Acid Position:

1007

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

72.3

40.1

Major BPS

82.6

0.81

0.9

83.3

27.7

Major PPT

78.1

0.63

0.9

74.3

34.4

Minor 5ss

45.1

-0.5

3.2

65.3

46.1

Minor BPS

58.9

0.26

1.6

65.01

41.9

Associated Gene:

Gene:

EFCAB5

Ensembl Gene ID:

ENSAPLG00000011243

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032701

7152792 - 7189414

36623

ENSAPLT00000011715

7152792 - 7189414

36623